CSA on Tuesday announced that De Kock is the new South Africa captain in the 50-over format.
Du Plessis was not included in the squad for the three-match ODI series against the world champions, which starts on February 4, CSA making the announcement a day after England won at St George's Park in the penultimate Test to take a 2-1 lead.
All-format skipper Du Plessis revealed after that loss in Port Elizabeth that he plans to lead his country until at least the T20 World Cup in Australia this year, but the fourth Test against England may be his last on home soil.
Soon after De Kock had seemingly been installed as ODI captain, Zondi stated that the wicketkeeper-batsman has only taken over on a temporary basis.
He told ESPNcricinfo: "We need to create leaders. Faf is still the captain and he is not out of the picture at all.
"This is part of our succession plan. Quinny is one of the guys we have identified for the future."
CSA acting director of cricket Graeme Smith appeared to introduce De Kock as the long-term captain earlier in the day.
"We all know the quality of the player that Quinton de Kock has grown to become," Smith said. "Over the years, we have watched him grow in confidence and become one of the top ODI wicketkeeper batsmen in the world.
"He has a unique outlook and manner in which he goes about his business and is tactically very street smart.
"We are confident that the new leadership role will bring out the best in him as a cricketer and that he can take the team forward into the future and produce results that South Africans the world over can be very proud of.
"We wish him the very best in this new role and look forward to watching him make his mark in this series against the World Cup champions."
The three-match series begins at Dharamsala on Thursday, with further matches on Sunday and March 18.
De Kock, who took over as ODI skipper in January, led the Proteas to a 3-0 series whitewash of Australia earlier this month, with Du Plessis having been left out.
Du Plessis stood down as Test and Twenty20 captain in February, but was recalled to the squad for the trip to the sub-continent, and De Kock insisted the 35-year-old's experience will be key against the world's second-best one-day side.
"Obviously, Faf's come back and he plays a big role for us from a leadership point of view," De Kock told a news conference.
"He is here to help out a lot of the younger guys in our team. He still adds a lot of value for us and he knows he has a lot of value to give to this team.
"It's good to have him around. His experience that he's learned over the years will be a big help for us in this series.
"He was given a chance to have a break. It's been a long season. It was important for him to put his feet up for a little bit, gather his thoughts and I'm just glad to have him back with us.
"We're undecided where he's going to bat at the moment but we'll come up with a decision later."
While De Kock acknowledged South Africa's squad lacked experience of playing in India, he claims the team are full of confidence heading into the tour.
"We understand that we're coming here as quite an inexperienced side in these conditions. It's important guys like Faf, myself, David Miller, help out the guys, lead the way," he added.
"We have a greater understanding. India have become an unbelievable team but we're coming here with a lot of confidence and I'm sure we'll have a good series anyway."
De Villiers has made no secret of his desire to come out of international retirement, but last week emphatically denied reports Cricket South Africa had asked him to take a leadership role.
Quinton de Kock only replaced Faf du Plessis as white-ball captain earlier this year and a decision on the next Test skipper is expected to be announced in the near future.
Nkwe was surprised to read claims that De Villiers had been given the chance to take the captaincy and welcomed his swift denial of such claims.
He told Stats Perform: "I was shocked because from our position, we've never discussed anything like that.
"I was completely surprised because generally if something like that is going to happen myself and Mark [Boucher, head coach] would talk about it, including Graeme Smith [director of cricket], over a call, chat about ideas on who do we think would be captain going forward for however long.
"To see something like that was a complete surprise. I suppose maybe it could be someone out there just trying to make something out of nothing and I'm happy to see AB himself say that's not such.
"There's definitely been communication with regards to him returning because of the [Twenty20] World Cup and I know he would love to make an impact and win a World Cup for our country.
"That's clear, it's out there, he said it himself. But with regards to captaincy, that's pretty new to me and as far as I'm concerned nothing has been discussed behind the scenes."
The explosive batsman ended his Proteas career in May 2018 as he had "run out of gas".
Mark Boucher said he would try to tempt De Villiers to return to the international stage after he was appointed as head coach and the 36-year-old stated he would "love" to play for his country again, with the T20 World Cup due to be staged later this year.
Former captain De Villiers says that it has been requested that he not only comes out of retirement, but takes on a leadership role once again..
"The desire is there from my side to play for South Africa, and have been asked by Cricket South Africa to lead the Proteas again," he told Star Sports Cricket Connected.
"The most important thing to me is that I have got to be in top form, and I have got to be better than the player next to me. I
"f I feel I deserve my spot in the side, it becomes much easier for me to feel that I should be part of the playing XI.
"I have not been part of the Proteas for a while, and I feel that it’s important for myself and for other people to see that I am still good enough to be there."
Quinton de Kock took over from Faf du Plessis as South Africa's white-ball captain in January.
The batsman has not played international cricket since April 2018 but has been linked with a return ahead of the Twenty20 World Cup, which is scheduled to start in October in Australia.
De Villiers was quoted as saying to Star Sports Cricket Connected that he had not only held talks about a comeback but also over taking on a leadership role.
"The desire is there from my side to play for South Africa, and [I] have been asked by Cricket South Africa to lead the Proteas again," he said, before adding a comeback would only happen if he is "still good enough to be there" in the team.
However, the former Proteas skipper reacted to the story via Twitter on Wednesday.
"Reports suggesting Cricket SA have asked me to lead the Proteas are just not true," De Villiers tweeted out to his 6.9million followers.
"It's hard to know what to believe these days. Crazy times. Stay safe everyone."
De Villiers played in 114 Tests and 228 ODIs, averaging over 50 in both formats, as well as 78 T20 fixtures at international level. He retired in May 2018 having "run out of gas".
De Villiers has not been named in any of the Proteas' squads to face West Indies and Ireland next month.
After talks about a potential comeback ahead of the World Twenty20 concluded, no agreement was reached and the 37-year-old's retirement is now final.
"AB de Villiers finalises [his] international retirement," read a statement from Cricket South Africa on Tuesday.
"Discussions with AB de Villiers have concluded with the batsman deciding once and for all that his retirement will remain final."
De Villiers had also been linked with a comeback before the 2019 Cricket World Cup, but ended up not being selected after making a last-gasp offer to play in the tournament.
The veteran last played for South Africa in a Test match against Australia back in March 2018.
He played in 114 Tests for the Proteas and scored 8,765 runs at an average of 50.66, with 22 centuries as well as taking 222 catches, 101 of those as a wicketkeeper.
De Villiers was even more impressive in the ODI format, averaging 53.50 and racking up 25 hundreds in 228 appearances, while he also played in 78 T20Is.
South Africa will play two Tests and five T20Is against West Indies before three ODIs and three T20Is against Ireland.
Six uncapped players were named in the Test squad: Prenelan Subrayen, Lizaad Williams, Kyle Verreynne, Keegan Petersen, Sarel Erwee and Marco Jansen.
Dean Elgar will lead the 19-man squad for the first time as permanent Test skipper after replacing Quinton de Kock.
The hosts headed into the contest on the back of coronavirus-interrupted preparations and ructions behind the scenes between players and the national board, but scrapped their way to a competitive 262-9 despite no player passing 50.
Dhawan - captaining a largely second-string India, given Virat Kohli's Test squad have departed for their Test series in England next month - ensured the tourists reached their target with 80 balls to spare, while debutant Ishan Kishan (59) and Prithvi Shaw (43) also impressed - the latter hitting nine of his 24 deliveries to the boundary.
Avishka Fernando and wicketkeeper Minod Bhanuka put on 49 for the opening wicket before Fernando lobbed Yuzvendra Chahal's (2-52) first delivery to Manish Pandey at short cover to depart for 33.
Leg-spinner Chahal excelled in tandem with slow left-armer Kuldeep Yadav (2-48), who accounted for Bhanuka (27) and Bhanuka Rajapaksa – the number three's breezy 24 from 22 deliveries briefly threatening to change the tempo – to leave Sri Lanka 89-3.
From that point it was a repeated story of useful contributions without anything substantial. New captain Dasun Shanaka and Charith Asalanka diligently compiled 39 and 38 respectively before each falling to swing bowler Deepak Chahar (2-37), while Krunal Pandya's miserly left-arm spin (1-26) snared up the middle overs, leaving Chamika Karunaratne's unbeaten 43 off 35 balls as Sri Lanka's highest score.
Shaw made it clear India would not be shackled in similar fashion as he climbed into Sri Lanka from the off.
Isuru Udana's two overs disappeared for 27 – including three successive fours through the covers - and the score was 58 when Fernando caught Shaw at long-on off Dhananjaya de Silva, whose two wickets came at a steep cost of 49 runs in five overs.
Kishan, who enjoyed an unforgettable 23rd birthday, ensured there was little let-up. He danced down the pitch to dispatch Dhananjaya for six first ball, clattering the next for four more through cover point.
The youngster reached a half-century in 33 balls and edged his 42nd behind off Lakshan Sandakan but Dhawan remained as a regal presence, finding further willing allies in Manish Pandey (26) and Suryakumar Yadav (31 not out) to complete a resounding victory.
Shanaka wants more variety from Sri Lanka
The difference between two – in isolation, at least – impressive opening partnerships set the tone for the contest. But the end of the first powerplay, Sri Lanka were 55-1. India were already up to 91-1 after 10 overs. "The Indians batted aggressively," Shanaka said. "We needed to vary the pace as the ball was coming on to the bat nicely. In the next game, we will have to improve on that."
Dhawan laughing as the elder statesman
When you've top-scored as a victorious captain and also surpassed 6,000 career ODI runs, there is perhaps no better time for self-deprecation. Dhawan certainly thought so, claiming he did not have the required shots to reach three figures with an exciting young batting line-up firing all around him.
"I was telling them to take it easy actually," he beamed, before chuckling his way through a post-match presentation where Shaw was named player of the match despite scoring half as many runs as his skipper.
"The way these young boys play in the IPL, they get lots of exposure and they just finished the game in the first 15 overs only. I thought about my hundred but there were not many runs left. When Surya came out to bat, I thought I need to improve my skills."
Dhawan led India for the recent 3-0 whitewash of West Indies in the 50-over format, as Rohit Sharma was given a break before flying to the Caribbean for the ongoing Twenty20 International series.
Opener Dhawan will be the skipper again for three matches at Harare Sports Club, where Kohli will not get a chance to return to form.
Ravindra Jadeja, Shreyas Iyer and Rishabh Pant are among the other players who will not play in Zimbabwe, but batter Rahul Tripathi is set to make his debut.
Washington Sundar and Kuldeep Yadav got the nod along with the fit-again Deepak Chahar in a 15-man squad for series that starts on August 18.
India squad : Shikhar Dhawan (captain), Ruturaj Gaikwad, Shubman Gill, Deepak Hooda, Rahul Tripathi, Ishan Kishan, Sanju Samson, Washington Sundar, Shardul Thakur, Kuldeep Yadav, Axar Patel, Avesh Khan, Prasidh Krishna, Mohammed Siraj, Deepak Chahar.
Opening batsman Dhawan sustained the problem while fielding in the first innings of the third ODI against Australia - a series India won 2-1 - in Bengaluru on Sunday.
An MRI has since confirmed the left-hander sustained a grade two injury to his acromioclavicular joint and will begin rehabilitation at the National Cricket Academy in the first week of November.
Sanju Samson had replaced him in the T20 squad with Rohit Sharma and Mohammed Shami returning after being rested for the January series against Sri Lanka, while Prithvi Shaw got the nod for the ODIs.
The first of five T20s against New Zealand is at Eden Park on Friday, before the three ODIs begin with a meeting at Seddon Park on February 5.
T20 squad: Virat Kohli (captain), Rohit Sharma, Sanju Samson, KL Rahul, Shreyas Iyer, Manish Pandey, Rishabh Pant, Shivam Dube, Kuldeep Yadav, Yuzvendra Chahal, Washington Sundar, Jasprit Bumrah, Mohammed Shami, Navdeep Saini, Ravindra Jadeja, Shardul Thakur.
ODI squad: Virat Kohli (captain), Rohit Sharma, Prithvi Shaw, KL Rahul, Shreyas Iyer, Manish Pandey, Rishabh Pant, Shivam Dube, Kuldeep Yadav, Yuzvendra Chahal, Ravindra Jadeja, Jasprit Bumrah, Mohammed Shami, Navdeep Saini, Shardul Thakur, Kedar Jadhav.
Looking to overhaul India's 308-7 at Queen's Park Oval, West Indies were 133-1 at one stage, ideally placed to bounce back from their recent 3-0 drubbing by Bangladesh.
Yet they could not keep up the strong early running, finishing on 305-6 to lose the opener in the three-match series, a seventh consecutive ODI defeat to India at this ground.
Opener Dhawan, captaining India in the absence of the resting Rohit Sharma and a host of senior stars, was named man of the match. He provided the backbone of the tourists' innings but fell frustratingly short of a century when he was caught by Shamarh Brooks for 97 as he looked to cut away Gudakesh Motie to the ropes.
Shubman Gill had made 64 in a first-wicket stand of 119 before he was run out by a direct hit from home captain Nicholas Pooran, and it was Pooran who took a fine catch at cover off Motie's bowling to send Shreyas Iyer (54) on his way.
In the hosts' reply, Brooks made 46 and Kyle Mayers scored a sharp 75 before falling when he reached outside off stump at a wide-ish ball and got a nick through to wicketkeeper Sanju Samson.
Pooran cracked Prasidh Krishna for two consecutive sixes in the 32nd over to raise a slowing tempo, but he fell for 25 soon after. When Brandon King was caught in the deep for 54 in the 45th over, with 57 still required, that looked to be West Indies' hopes at an end.
There was a flourish though, and they were left needing 15 from the final over, with Akeal Hosein (32 not out) and Romario Shepherd (38no) narrowly failing to delivery the necessary heroics.
IYER LANDMARK
Iyer's 54 took him to 1,001 runs in ODIs, making him the equal-third fastest India batter to reach the 1,000-run milestone, alongside Navjot Singh Sidhu who also got there in 25 innings. Only Virat Kohli and Dhawan (24 innings each) reached four figures in fewer innings.
INDIA EXTEND DOMINANCE
India have now won 11 of their 12 most recent ODIs against West Indies, with the only loss coming in Chennai in December 2019. They have won the last four bilateral ODI series they have contested against West Indies in the Caribbean, and can seal a fifth in a row when game two takes place at the same ground on Sunday.
Former limited-overs captain Dhoni was not among the 27 India players to receive deals for the period from October 2019 to September 2020.
The wicketkeeper-batsman has not been in action since the semi-finals of the 2019 Cricket World Cup last July, though he has not officially retired from the international arena.
India coach Ravi Shastri previously said Dhoni had a chance of featuring at the T20 World Cup if he performed well in the Indian Premier League, which starts in March.
Dhoni made his international debut in an ODI against Bangladesh in 2004 and captained his country to glory at the 2007 World Twenty20, 2011 World Cup and 2013 Champions Trophy.
He featured in 90 Tests before retiring from the longest format in 2014.
Ambati Rayudu, Dinesh Karthik and Khaleel Ahmed also lost their central contracts, while Mayank Agarwal, Navdeep Saini, Deepak Chahar, Shardul Thakur, Shreyas Iyer and Washington Sundar were granted deals by the BCCI.
Shastri's reign will come to an end following the tournament in the United Arab Emirates and the Board of Control for Cricket in India last month invited applications for the post.
Legendary former India batter Dravid was expected to succeed Shastri and his appointment was confirmed while India were playing Afghanistan in a crucial World Cup match on Wednesday.
Dravid, 48, will start his tenure with a home T20I series versus New Zealand this month followed by two Tests against the Black Caps.
Shastri took over as head coach of his country for a second time in 2017 and helped guide India to the top of the Test rankings and an inaugural World Test Championship against New Zealand, which the Black Caps won this year.
Dravid said: "It is an absolute honour to be appointed as the new head coach of the Indian Cricket Team and I am really looking forward to this role.
"Under Mr Shastri, the team has done very well, and I hope to work with the team to take this forward. Having worked closely with most of the boys either at NCA, U19 and India A setup, I know they have the passion and desire to improve every day.
"There are some marquee multi-team events in the next two years, and I look forward to working with the players and the support staff to achieve our potential."
Sourav Ganguly, president of the BCCI, said: "The BCCI welcomes Rahul Dravid as the head coach of India's senior men team.
"Rahul has had an illustrious playing career and is one of the greats of the game. He has also served Indian cricket as head of National Cricket Academy (NCA) with distinction. Rahul’s effort at the NCA has nurtured several young cricketing talents who have gone on to represent the country at the international stage.
"I am hopeful that his new stint will take Indian cricket to new heights."
Du Plessis and Van der Dussen were both involved in the T20 series with Australia but were rested for the ongoing ODI series, which South Africa lead 1-0.
However, they will feature in a three-match series in India, which starts in Dharamsala on March 12.
Also included is left-arm spinner Linde, whose only previous international appearance came in the third Test against India last year in Ranchi, where South Africa lost by an innings and 202 runs.
Linde took 4-133 in that heavy defeat, and has 86 wickets in his list A career at an average of 28.95.
Kyle Verreynne, whose 48 off 64 balls helped the Proteas beat Australia in the first ODI, keeps his place in the squad. Tabraiz Shamsi is unavailable for selection as he and his wife are expecting the birth of their first child.
"It is exciting to see the amount of competition for spots that we have within the team and in the franchises, it's a good headache for us as selectors to have," Linda Zondi, CSA's independent selector, said.
"We are satisfied with our picks for what will certainly be a challenging tour of India. We saw some promising performances last year from the T20 squad that travelled there and we wanted to give a player like George Linde another crack at the conditions which seemed to really suit him.
"We are also particularly pleased with the balance of youth and experience that we have achieved while our young leadership group continues to establish itself. We are looking forward to some good performances in this relatively short tour."
South Africa squad: Quinton de Kock (captain), Temba Bavuma, Faf du Plessis, Beuran Hendricks, Heinrich Klaasen, George Linde, Keshav Maharaj, David Miller, Lungi Ngidi, Anrich Nortje, Andile Phehlukwayo, Lutho Sipamla, Jon-Jon Smuts, Rassie van der Dussen, Kyle Verreynne.
Du Plessis has stepped down as Proteas skipper across all three formats in recent weeks, with Quinton de Kock taking charge.
Although the 35-year-old is playing against Australia in the ongoing Twenty20 international series, he missed the clashes with England in the same format earlier in February.
And Du Plessis will be absent again when South Africa return to 50-over action on Saturday.
"With a busy year and a half in mind, the selectors have opted to give further rest to Faf du Plessis and other senior players, such as Rassie van der Dussen and Dwaine Pretorius, while giving themselves an opportunity to see what some of the country's up and coming talents have to offer," CSA posted on its Twitter page as the squad was announced.
Keshav Maharaj is granted a recall, having last played limited-overs cricket for the Proteas in August 2018.
The 30-year-old left-arm spinner has been a Test regular in recent years but is yet to play T20s for South Africa and has featured in just four ODIs.
Meanwhile, Lutho Sipamla, who debuted against England at the start of the month, and Janneman Malan, with two T20 caps, are among the younger players included, along with Kyle Verreynne.
Verreynne, 22, is yet to feature for his country at senior level.
South Africa ODI squad in full: Quinton de Kock, Temba Bavuma, David Miller, Kagiso Rabada, Andile Phehlukwayo, Tabraiz Shamsi, Lungi Ngidi, Beuran Hendricks, Heinrich Klaasen, Janneman Malan, Jon-Jon Smuts, Anrich Nortje, Lutho Sipamla, Keshav Maharaj, Kyle Verreynne.
Joe Root's England side are due to start their bid to regain the urn at The Gabba on December 8, with the fifth and final Test scheduled to begin at Optus Stadium in Perth on January 18.
However, England players have raised concerns about the possibility of their families not being able to join them for the trip due to Australia's tight border controls during the coronavirus pandemic, as well as the prospect of lengthy quarantines.
Multi-format players such as Ben Stokes and Jos Buttler face the prospect of four months away from home as the T20 World Cup takes place in the United Arab Emirates and Oman ahead of the Ashes.
Talks between the ECB and Cricket Australia are ongoing to reach a compromise and Harrison is optimistic that a full-strength England party will make the trip.
"We are working very closely with Cricket Australia (CA) and I had my latest conversation with my counterpart at CA yesterday," Harrison said. "We are speaking every few days on the matter.
"All the right conversations are happening at government level in Australia and we will be using our own diplomatic channels in the UK to ensure the view of the players and the ECB [is heard].
"This is not players asking for anything unreasonable – these are very reasonable requests that we are asking the Australian government to give some leniency, frankly.
"It's going to be important for us to ensure we can give comfort to players that their families are going to be able to be in Australia and that those conditions in which they are quarantined will be reasonable, enabling the players to be at their best in that Test series.
"It's a conversation that's going to take place over the next few weeks but I am very confident we will get to a place where we can fulfil our obligations to tour."
Mott's future has been called into question in the aftermath of England's failure to defend their T20 World Cup crown in the United States and West Indies, losing to India in the semi-finals.
Mott also oversaw England's calamitous 50-over World Cup campaign last year, as they lost six of their nine matches in India and crashed out in the group stage.
Reports earlier this week suggested the decision had already been made to dispense with Mott's services, with Eoin Morgan a contender to succeed him, though the former limited-overs captain has since said he has no interest in the role.
Asked by BBC Test Match Special if Mott's future had already been decided, Gould said: "That's not true. That's certainly not true.
"Matthew Mott is a really good guy and coach. He's got a great track record and it is the same with [captain] Jos [Buttler].
"We are always assessing options - that is what happens in high-performance sport, you are always assessing your options.
"You never want to be drawn into being given the dreaded vote of confidence or anything like that. Competitive sport always brings scrutiny and decisions.
"We'll constantly want to assess our options but we'll always want to do the right thing by the sport, the team and individuals."
George Floyd's death while in police custody in Minneapolis last month led to protests in the United States and far beyond.
Former England batsman Michael Carberry this week stated that cricket is "rife with racism" and "black people are not important to the structure of English cricket".
James Anderson, England's leading Test wicket-taker, said the national team will have conversations about what they can do to make a stand and be more active in combating racism.
The ECB says it will listen and learn from the Black Lives Matter movement and will act in a bid to break down barriers.
"We have listened carefully to those who have spoken out in recent weeks about their experiences of being black in cricket, sport and society," the governing body said in a statement.
"We admire them for being vocal on this crucial topic. We know that systemic racism spans institutions and sectors across the country and we know that our sport is not immune.
"We truly believe that cricket is a game for everyone but understand that sadly, barriers to its enjoyment exist for many communities. We have made progress in bringing cricket to more and more people around the country and it is our resolve to break down barriers and reform our structures everywhere across the game.
"In recent weeks we have reflected, and acknowledge that black players and fans, who have contributed so much to the history of our game, now feel disenfranchised. They do not feel as if cricket is a game for them. This must change.
"That is why it's so important that we continue to listen to the voices of those who have spoken out, to educate ourselves and face uncomfortable truths in order to create action internally and throughout the game, to ensure long-term change.
"We will now work to engage community leaders and black influencers within cricket so that we can review and evolve our existing inclusion and diversity work and specifically address the issues raised by the black community.
"From there, it is our overall desire to create demonstrable action, in order to deliver meaningful and long-term change that permeates every layer of the game."
Barry O'Brien has been operating as the interim chair since October, when Ian Watmore stepped down following a wave of coronavirus-related challenges and scrutiny for cancelling England's tour of Pakistan.
However, the ECB confirmed O'Brien has now resigned from the role due to ill health, with deputy chair Martin Darlow to take charge while the board search for a permanent appointment.
A statement read from the ECB read: "The ECB board met last night [Tuesday] and has agreed to restart the process for recruiting its next permanent chair.
"Following an ongoing process involving a number of strong candidates undertaking interviews with both the nominations committee and a cricket panel it was felt that no single candidate was able to fully meet the criteria to become next chair.
"In light of this, the board decided that the process should now be restarted. A new nominations committee will be appointed, chaired by senior independent director Brenda Trenowden, to run the new process."
The announcement comes at a time of wholesale change within English cricket, with Rob Key confirmed as the new managing director of men's cricket to replace Andrew Strauss, who had been in interim charge.
The ECB is advertising for separate coaches for the vacant Test and limited-overs roles following the dismissal of Chris Silverwood, with Gary Kirsten, Simon Katich and Graham Ford among the favourites for the red-ball side.
Meanwhile, Ben Stokes is widely expected to be appointed as England's Test captain following the resignation of skipper Joe Root earlier in April.
England start their next Test series against New Zealand on June 2, while they begin an ODI series versus the Netherlands on June 17.
The all-rounder will undergo an operation on his left arm on Thursday, with his spot in the ODI and T20 squads taken by D'Arcy Short.
Maxwell had been recalled by his country for the first time since taking a break from cricket in October to concentrate on his mental health, but he now faces up to eight weeks on the sidelines.
After the news was confirmed by Cricket Australia, Maxwell wrote on Twitter: "Shattered to be missing the South Africa tour. I wish all the lads the best of luck over there and I'll be watching from home!
"Thanks for all the wishes of support."
The Wallabies face three T20s and three ODIs against the Proteas, with Maxwell's absence coming after an injury he carried in the closing weeks of the Big Bash League season.
The 31-year-old helped Melbourne Stars to the final of that competition, where they lost to Sydney Sixers.
National selector Trevor Hohns lamented the loss of Maxwell but is confident Western Australia's Short can fill the void.
"We are disappointed to lose Glenn this close to the tour as we were looking forward to welcoming him back to the national side in both the 20- and 50-over formats after his break during the summer," Hohns said.
"Unfortunately, the pain he has experienced in the elbow in the latter stages of the BBL increased over the weekend and he will have surgery immediately to rectify the situation.
"An opportunity has now presented itself for D'Arcy and we're confident he'll make the most of whatever opportunities come his way in South Africa."
Having been reintegrated to the team after his involvement in the ball-tampering scandal against South Africa in 2018 resulted in a one-year ban, Warner edged out Steve Smith by one vote to win the country's top individual prize.
He expressed his thanks to team-mates, coaches and Cricket Australia after beating Smith and last year's winner Pat Cummins to the accolade.
Warner also fought back the tears as he thanked his parents and wife Candice, who he described as his "rock and inspiration".
"I'm taken aback by this," said Warner. "It has been quite challenging. I want to thank Cricket Australia, Belinda Clark, Kevin Roberts and Justin Langer for that opportunity [to come back].
"You were really working your backsides off behind the scenes to reintegrate the three of us [Warner, Smith and Cameron Bancroft] into the cricketing family.
"Everything to get us back in there amongst the guys, taking us to Dubai, starting that way, was absolutely fantastic and the way [ODI captain] Aaron Finch and [Test captain] Tim Paine accepted us and were always in contact with us, we really appreciate that.
"I want to thank my home club team at Randwick-Petersham for giving me that opportunity to go out there and play grade cricket.
"I realised a lot of things during that time off that we don't actually understand or realise when we're in this bubble, the importance of what this game is and the smiles on the faces that we bring to a lot of people.
"Sitting back and reflecting upon the time I had away from the game, you don't realise the importance and effect it has on everyone. It put things in perspective.
"Getting cricket taken away from you, something you've always dreamed of, it really hurt, so I'm just extremely grateful to be accepted back by Cricket Australia, the peers and also by the fans.
"I had mixed emotions about how I was going to be received back here at home - I definitely knew what I was in for in England and obviously in a couple of weeks' time [in South Africa]. But it's just been remarkable to come back.
"Standing here I'm just really proud to have that opportunity again."
Warner struggled in the Ashes but otherwise enjoyed a superb year across all formats.
But he thought his woes against England would have cost him a shot at the Allan Border Medal, which only Michael Clarke and Ricky Ponting have won on more occasions.
"It was a shock and a surprise," he said. "When it is that close, you really don't know so it's a big surprise to be honest.
"I had an absolutely horrendous Ashes and generally, across the Test matches, that's where a lot of the votes are polled, so I didn't think I had a chance.
"I really had the hunger and determination to come back and do the best for our team. We've been great across all three formats for 12 months, I couldn't be any prouder to stand here and receive the award."